C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Wilms tumour 1-associating protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060475 Wtap 10090 - 17:12966796-12992546 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000007007 Wtap-001 12966799-12992259 protein_coding
  ENSMUST00000159104 Wtap-007 12974997-12983473 protein_coding
  ENSMUST00000159551 Wtap-002 12966796-12992497 protein_coding
  ENSMUST00000159986 Wtap-004 12972685-12992192 protein_coding
  ENSMUST00000160781 Wtap-003 12973552-12992546 protein_coding
  ENSMUST00000161901 Wtap-006 12981751-12983972 processed_transcript
  ENSMUST00000162395 Wtap-005 12980855-12986241 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000007007ENSMUST00000159104ENSMUST00000159551ENSMUST00000159986ENSMUST00000160781ENSMUST00000162395
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000007007 7.107±2.70 5.624±0.99 7.865±0.71 7.230±2.65 7.070±1.60 5.624±1.58 3.267±0.84 8.633±1.02 8.715±5.17 10.054±1.17 2.913±1.01 6.596±1.87 11.997±5.82 1.991±0.88
ENSMUST00000159104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.577±6.75 4.578±0.00
ENSMUST00000159551 N/A 5.111±0.35 N/A N/A N/A 3.095±0.05 N/A N/A 1.441±0.15 N/A 3.146±0.90 2.888±1.06 6.476±0.00 0.494±0.08
ENSMUST00000159986 N/A N/A N/A 3.368±0.00 N/A N/A N/A N/A 1.357±0.07 1.996±0.00 N/A 1.335±0.00 1.661±0.00 N/A
ENSMUST00000160781 4.892±0.45 15.387±1.25 6.499±0.54 8.340±2.44 4.652±0.91 7.143±1.25 4.086±0.52 6.079±1.00 4.855±2.67 7.101±1.23 4.078±1.79 6.632±2.31 8.982±3.98 1.834±0.80
ENSMUST00000162395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.168±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089P CIL_00089P_0002 VISTA 17:12489717-13093070
CIL_0003I8 CIL_0003I8_0002 CGP 17:12942890-12992546
CIL_0003I5 CIL_0003I5_0002 CGP 17:12966796-13018119

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000381 IEA regulation of alternative mRNA splicing, via spliceosome
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0006397 IEA mRNA processing
GO:0007049 IEA cell cycle
GO:0007275 IEA multicellular organismal development
GO:0008380 IEA RNA splicing
GO:0016607 IEA nuclear speck
GO:0031965 IEA nuclear membrane
GO:0036396 IEA MIS complex
GO:0048024 IEA regulation of mRNA splicing, via spliceosome
GO:0080009 IEA mRNA methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042642 wtap Wilms tumor 1 associated protein protein_coding Danio_rerio
ENSG00000146457 WTAP Wilms tumor 1 associated protein protein_coding Homo_sapiens

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