C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histocompatibility 2, K1, K region
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000061232 H2-K1 10090 - 17:33996017-34000333 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025181 H2-K1-001 33996053-34000333 protein_coding
  ENSMUST00000087189 H2-K1-005 33996457-34000257 protein_coding
  ENSMUST00000114311 H2-K1-002 33996018-34000283 retained_intron
  ENSMUST00000172782 H2-K1-007 33997509-33999474 processed_transcript
  ENSMUST00000172912 H2-K1-003 33996017-34000289 protein_coding
  ENSMUST00000173075 H2-K1-010 33997363-34000260 protein_coding
  ENSMUST00000173317 H2-K1-009 33996592-33997781 retained_intron
  ENSMUST00000173543 H2-K1-008 33996349-33997157 retained_intron
  ENSMUST00000173602 H2-K1-004 33996039-33997755 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025181ENSMUST00000087189ENSMUST00000114311ENSMUST00000172912ENSMUST00000173075
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025181 672.389±221.60 301.913±156.71 223.689±11.82 2.848±0.10 1265.501±191.76 611.177±87.67 103.653±31.08 158.909±16.97 307.488±231.60 546.104±164.08 48.519±18.10 232.096±84.94 48.877±21.32 38.664±18.68
ENSMUST00000087189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 51.472±0.00 N/A N/A
ENSMUST00000114311 N/A 92.332±11.08 N/A 0.473±0.07 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172912 N/A 252.712±70.73 67.694±1.63 0.966±0.13 N/A 135.364±25.46 30.142±2.61 36.526±11.55 201.413±189.79 53.587±0.00 6.394±0.48 49.415±17.29 76.752±73.11 5.714±0.89
ENSMUST00000173075 N/A N/A N/A 2.500±0.00 N/A N/A N/A N/A N/A N/A N/A 115.689±0.00 N/A 11.116±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001916 IDA positive regulation of T cell mediated cytotoxicity
GO:0002485 IDA antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent
GO:0005515 IPI protein binding
GO:0006955 IEA immune response
GO:0009897 IDA external side of plasma membrane
GO:0016021 IEA integral component of membrane
GO:0030670 TAS phagocytic vesicle membrane
GO:0042590 IDA antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0042605 IDA peptide antigen binding
GO:0042612 IEA MHC class I protein complex
GO:0042742 IDA defense response to bacterium
GO:0048839 IDA inner ear development
GO:0071556 TAS integral component of lumenal side of endoplasmic reticulum membrane

Homologs

No Homologs available.

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