C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP/GTP binding protein-like 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000061298 Agbl4 10090 + 4:110397661-111664324 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000080744 Agbl4-010 110397791-111657510 protein_coding
  ENSMUST00000097920 Agbl4-009 110397791-111657510 protein_coding
  ENSMUST00000106587 Agbl4-004 110397698-110662970 protein_coding
  ENSMUST00000106589 Agbl4-005 110397661-110955596 protein_coding
  ENSMUST00000106591 Agbl4-003 110397698-111567010 protein_coding
  ENSMUST00000106592 Agbl4-001 110397698-111664324 protein_coding
  ENSMUST00000136433 Agbl4-006 111118841-111259039 processed_transcript
  ENSMUST00000142460 Agbl4-008 111566725-111657507 processed_transcript
  ENSMUST00000148038 Agbl4-002 111118911-111620490 protein_coding
  ENSMUST00000154123 Agbl4-007 111566695-111656569 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000080744ENSMUST00000097920ENSMUST00000106587ENSMUST00000106589ENSMUST00000106591ENSMUST00000106592ENSMUST00000142460ENSMUST00000154123
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000080744 N/A N/A N/A N/A N/A N/A N/A N/A 0.133±0.01 N/A 7.779±0.22
ENSMUST00000097920 0.082±0.01 N/A 0.441±0.01 0.020±0.00 N/A 0.061±0.01 N/A 0.087±0.05 0.224±0.13 0.029±0.00 28.986±13.71
ENSMUST00000106587 N/A N/A N/A N/A N/A 0.072±0.00 0.003±0.00 N/A N/A N/A N/A
ENSMUST00000106589 0.142±0.00 N/A N/A N/A N/A 0.076±0.00 N/A 0.228±0.11 N/A 0.071±0.00 N/A
ENSMUST00000106591 N/A 0.006±0.00 N/A N/A 0.050±0.03 0.035±0.02 N/A 0.159±0.00 0.550±0.00 N/A N/A
ENSMUST00000106592 0.093±0.05 0.009±0.00 1.670±1.84 N/A 0.038±0.00 N/A N/A 0.070±0.03 0.116±0.07 0.015±0.01 1.743±0.00
ENSMUST00000142460 0.126±0.00 N/A N/A N/A N/A 0.025±0.00 N/A N/A 0.241±0.01 N/A N/A
ENSMUST00000154123 0.095±0.00 0.022±0.01 N/A N/A 0.066±0.00 N/A N/A 0.118±0.00 0.318±0.11 0.066±0.01 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000632 CIL_000632_0003 CGP 4:110397661-111664324

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004181 IDA metallocarboxypeptidase activity
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding
GO:0015631 IDA tubulin binding
GO:0035609 IDA C-terminal protein deglutamylation
GO:0035610 IDA protein side chain deglutamylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068050 agbl4 ATP/GTP binding protein-like 4 protein_coding Danio_rerio
ENSG00000186094 AGBL4 ATP/GTP binding protein-like 4 protein_coding Homo_sapiens

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