C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATH1, acid trehalase-like 1 (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062031 Athl1 10090 + 7:140941391-140947664 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000079403 Athl1-001 140941581-140947664 protein_coding
  ENSMUST00000163094 Athl1-004 140942310-140946844 nonsense_mediated_decay
  ENSMUST00000164337 Athl1-002 140941391-140947656 nonsense_mediated_decay
  ENSMUST00000164580 Athl1-006 140942536-140947660 protein_coding
  ENSMUST00000168084 Athl1-005 140941571-140943112 processed_transcript
  ENSMUST00000169736 Athl1-003 140941566-140947658 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079403ENSMUST00000164337ENSMUST00000164580ENSMUST00000169736
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079403 18.994±1.62 29.642±5.41 14.500±1.70 3.487±0.75 17.067±2.37 18.527±3.68 2.787±0.24 22.740±3.19 11.273±6.70 13.300±2.13 0.828±0.42 20.566±7.92 1.908±1.54 0.509±0.28
ENSMUST00000164337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.248±0.00 N/A 0.275±0.00 N/A
ENSMUST00000164580 N/A N/A N/A 0.996±0.00 8.094±0.00 N/A N/A N/A N/A N/A 0.866±0.00 4.575±0.00 0.287±0.14 0.077±0.00
ENSMUST00000169736 6.349±0.89 5.246±0.48 6.400±1.72 1.413±0.78 5.394±0.64 5.774±1.22 1.670±0.85 3.527±0.52 3.198±0.70 6.020±0.18 0.522±0.35 7.127±2.63 1.410±0.90 0.387±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002B4 CIL_0002B4_0002 CGP 7:140920902-140947664
CIL_0002B6 CIL_0002B6_0002 CGP 7:140941391-140950239

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005575 ND cellular_component
GO:0005975 IEA carbohydrate metabolic process
GO:0008150 ND biological_process
GO:0016798 IEA hydrolase activity, acting on glycosyl bonds

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014311 athl1 ATH1, acid trehalase-like 1 (yeast) protein_coding Danio_rerio
ENSG00000142102 ATHL1 ATH1, acid trehalase-like 1 (yeast) protein_coding Homo_sapiens

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