C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 398
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062519 Zfp398 10090 + 6:47835661-47868257 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000079881 Zfp398-001 47835664-47867688 protein_coding
  ENSMUST00000114598 Zfp398-002 47835695-47868257 protein_coding
  ENSMUST00000146202 Zfp398-003 47835661-47843647 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079881ENSMUST00000114598ENSMUST00000146202
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079881 1.021±0.05 4.726±0.69 0.494±0.00 2.337±1.01 2.508±0.94 0.494±0.08 1.766±0.34 0.801±0.16 1.908±1.55 N/A 6.628±2.07 0.568±0.24 1.495±0.47
ENSMUST00000114598 1.886±0.97 1.820±0.45 N/A 2.293±0.31 1.693±0.42 1.143±0.00 1.332±0.57 0.557±0.25 1.476±0.40 0.265±0.16 5.342±1.01 0.284±0.12 0.461±0.13
ENSMUST00000146202 N/A N/A 0.296±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.042±0.01 0.072±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XN CIL_0004XN_0002 CGP 6:47835661-47908485

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000197024 ZNF398 zinc finger protein 398 protein_coding Homo_sapiens

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