C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cadherin-like and PC-esterase domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062980 Cped1 10090 + 6:21985916-22256404 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000115382 Cped1-003 21986596-22124036 protein_coding
  ENSMUST00000115383 Cped1-008 21985916-22256404 protein_coding
  ENSMUST00000137437 Cped1-001 21985916-22240003 protein_coding
  ENSMUST00000141064 Cped1-004 21985944-22009702 processed_transcript
  ENSMUST00000151315 Cped1-005 21986892-22069450 protein_coding
  ENSMUST00000153922 Cped1-002 21985944-22125009 nonsense_mediated_decay
  ENSMUST00000154734 Cped1-007 22135546-22145551 retained_intron
  ENSMUST00000156621 Cped1-006 22025943-22085138 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115382ENSMUST00000115383ENSMUST00000137437ENSMUST00000141064
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115382 N/A 4.090±1.08 N/A N/A 5.540±1.86 3.054±0.22 N/A 2.416±0.00 N/A N/A N/A 17.144±2.12 N/A N/A
ENSMUST00000115383 28.257±14.40 2.462±1.01 13.117±0.02 1.288±0.38 9.404±3.38 2.802±1.01 4.228±0.23 2.375±0.91 3.371±1.54 14.517±0.72 3.604±0.51 21.786±9.02 1.131±0.94 0.828±0.04
ENSMUST00000137437 N/A N/A N/A 0.312±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.360±0.23 0.907±0.00
ENSMUST00000141064 N/A 2.155±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SO CIL_0007SO_0002 VISTA 6:21578055-22180750
CIL_0005U9 CIL_0005U9_0003 CGP 6:21949571-22256404
CIL_0004XW CIL_0004XW_0003 CGP 6:21985916-22298522

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045747 cped1 cadherin-like and PC-esterase domain containing 1 protein_coding Danio_rerio
ENSG00000106034 CPED1 cadherin-like and PC-esterase domain containing 1 protein_coding Homo_sapiens

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