C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GPN-loop GTPase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000064037 Gpn1 10090 + 5:31494741-31512903 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000076949 Gpn1-001 31494741-31512903 protein_coding
  ENSMUST00000117700 Gpn1-003 31494753-31497716 protein_coding
  ENSMUST00000123197 Gpn1-004 31495001-31497324 processed_transcript
  ENSMUST00000125689 Gpn1-007 31507061-31510859 retained_intron
  ENSMUST00000131628 Gpn1-002 31494752-31503024 retained_intron
  ENSMUST00000133891 Gpn1-006 31494794-31503530 retained_intron
  ENSMUST00000146880 Gpn1-005 31494767-31499282 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076949ENSMUST00000117700ENSMUST00000125689ENSMUST00000131628ENSMUST00000133891ENSMUST00000146880
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076949 5.729±0.57 4.516±0.80 4.204±0.33 8.881±2.39 4.059±1.22 2.795±0.30 4.238±0.31 4.701±0.47 3.575±1.70 4.538±0.58 3.816±0.91 6.382±1.09 5.241±1.82 2.404±0.65
ENSMUST00000117700 N/A 19.474±11.36 N/A N/A 8.938±0.47 7.336±1.43 N/A 5.239±0.00 N/A 8.854±1.33 N/A 7.758±0.00 9.600±2.47 N/A
ENSMUST00000125689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.533±0.00 N/A N/A
ENSMUST00000131628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.613±0.05 N/A N/A
ENSMUST00000133891 N/A 6.609±0.05 N/A N/A 8.693±0.00 N/A N/A N/A 3.336±0.00 N/A 4.110±0.00 N/A N/A N/A
ENSMUST00000146880 N/A 18.442±8.68 N/A N/A N/A 10.090±1.28 N/A N/A 7.109±0.95 N/A N/A 9.740±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013L CIL_00013L_0002 CGP 5:31485859-31512903
CIL_00013M CIL_00013M_0002 CGP 5:31494741-31527807

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043928 GPN1 GPN-loop GTPase 1 protein_coding Danio_rerio
ENSG00000198522 GPN1 GPN-loop GTPase 1 protein_coding Homo_sapiens

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