C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 172, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000064138 Fam172a 10090 + 13:77708690-78166238 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000091459 Fam172a-201 77708690-78166238 protein_coding
  ENSMUST00000099358 Fam172a-202 77708690-78166238 protein_coding
  ENSMUST00000163257 Fam172a-203 77708690-78166238 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000091459ENSMUST00000099358ENSMUST00000163257
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000091459 0.563±0.02 2.478±0.00 4.876±0.18 5.990±1.12 N/A 0.973±0.38 0.730±0.00 0.658±0.08 1.942±1.25 2.216±0.64 1.525±0.39 4.677±2.03 3.107±0.43 0.867±0.57
ENSMUST00000099358 4.816±1.64 19.453±3.87 N/A 2.962±0.10 7.504±6.87 5.051±1.66 1.232±0.45 2.982±1.18 1.507±0.76 6.480±3.52 N/A 12.438±3.44 N/A 1.063±0.56
ENSMUST00000163257 2.405±0.06 N/A 1.019±0.00 N/A 1.018±0.19 N/A 0.718±0.00 0.604±0.09 0.521±0.30 1.598±0.31 N/A 1.452±0.73 0.404±0.00 1.302±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007N1 CIL_0007N1_0005 UCNEbase 13:76802395-80648053
CIL_00097W CIL_00097W_0002 VISTA 13:77189933-77791149
CIL_00080H CIL_00080H_0002 VISTA 13:77246465-77849738
CIL_0008SK CIL_0008SK_0002 VISTA 13:77592212-78193533
CIL_0004Z9 CIL_0004Z9_0002 CGP 13:77708690-78166238

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0005783 IEA endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052697 fam172a family with sequence similarity 172, member A protein_coding Danio_rerio
ENSG00000113391 FAM172A family with sequence similarity 172, member A protein_coding Homo_sapiens

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