C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 31, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000066152 Slc31a2 10090 + 4:62262562-62298411 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000084530 Slc31a2-001 62286449-62298411 protein_coding
  ENSMUST00000107467 Slc31a2-002 62291547-62297477 protein_coding
  ENSMUST00000107468 Slc31a2-003 62262562-62297355 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084530ENSMUST00000107467ENSMUST00000107468
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084530 18.360±2.78 30.362±7.04 9.182±2.56 3.209±2.09 13.270±0.51 10.474±2.02 7.100±0.83 12.855±2.49 5.802±1.83 17.258±0.93 2.202±0.59 17.946±6.95 12.429±5.60 5.190±2.33
ENSMUST00000107467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.658±1.09
ENSMUST00000107468 N/A 10.840±0.90 N/A N/A 3.724±0.00 N/A N/A N/A 2.889±0.00 N/A N/A 9.635±1.88 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Y6 CIL_0000Y6_0002 CGP 4:62189540-62298411
CIL_0004CH CIL_0004CH_0002 CGP 4:62262562-62360548

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005770 IDA late endosome
GO:0006878 IGI cellular copper ion homeostasis
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0055037 IDA recycling endosome
GO:1902311 IMP regulation of copper ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076092 slc31a2 solute carrier family 31 (copper transporters), member 2 protein_coding Danio_rerio
ENSG00000136867 SLC31A2 solute carrier family 31 (copper transporter), member 2 protein_coding Homo_sapiens

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