Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	calcium channel, voltage-dependent, gamma subunit 3
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000066189	Cacng3	10090	+	7:122670492-122769393	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000084615		Cacng3-001	122670492-122769393	protein_coding
	ENSMUST00000182095		Cacng3-003	122671418-122768540	protein_coding
	ENSMUST00000182563		Cacng3-002	122671391-122768421	protein_coding

Expression Patterns

Transcript ID	Adrenal	Bladder	Brain	Breast	Colon	Kidney	Liver	Muscle	Ovary	Placenta	Testis
ENSMUST00000084615	0.154±0.02	0.009±0.00	5.630±4.45	0.035±0.02	0.024±0.01	0.024±0.00	0.015±0.00	0.025±0.00	0.033±0.00	0.059±0.06	0.009±0.00
ENSMUST00000182095	N/A	0.004±0.00	54.313±0.00	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
ENSMUST00000182563	N/A	N/A	30.312±0.00	0.027±0.00	N/A	N/A	0.017±0.00	N/A	N/A	N/A	N/A

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0003VA	CIL_0003VA_0003	CGP	7:122288751-122769393
CIL_0003VB	CIL_0003VB_0003	CGP	7:122670492-123002557

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005244	IEA	voltage-gated ion channel activity
GO:0005262	IEA	calcium channel activity
GO:0006816	IEA	calcium ion transport
GO:0032281	ISS	alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0070588	IEA	calcium ion transmembrane transport
GO:2000311	ISS	regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000076401	cacng3b	calcium channel, voltage-dependent, gamma subunit 3b	protein_coding	Danio_rerio
ENSG00000006116	CACNG3	calcium channel, voltage-dependent, gamma subunit 3	protein_coding	Homo_sapiens

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