C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histocompatibility 2, T region locus 23
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000067212 H2-T23 10090 - 17:36029773-36032855 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102678 H2-T23-001 36029976-36032855 protein_coding
  ENSMUST00000174161 H2-T23-003 36029773-36032541 retained_intron
  ENSMUST00000174471 H2-T23-005 36031763-36032730 retained_intron
  ENSMUST00000174839 H2-T23-002 36030020-36032690 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102678ENSMUST00000174161ENSMUST00000174471ENSMUST00000174839
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102678 60.384±19.38 61.975±3.70 77.530±6.68 2.168±0.44 104.510±42.64 170.585±29.79 12.782±4.84 75.410±9.98 141.235±101.75 95.143±24.95 5.946±2.14 60.291±14.21 9.038±5.51 1.407±0.65
ENSMUST00000174161 N/A N/A N/A 0.410±0.25 N/A N/A 1.011±0.08 N/A N/A N/A 0.485±0.04 3.191±0.53 0.742±0.38 0.053±0.03
ENSMUST00000174471 N/A 52.219±10.64 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174839 11.944±1.92 10.668±1.34 19.522±2.39 0.540±0.22 30.458±13.85 19.759±1.60 4.201±0.17 6.956±0.01 5.966±3.08 15.439±4.54 1.408±1.03 7.945±2.22 1.217±0.85 0.235±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001916 IDA positive regulation of T cell mediated cytotoxicity
GO:0002474 IEA antigen processing and presentation of peptide antigen via MHC class I
GO:0002489 IDA antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent
GO:0006955 IEA immune response
GO:0030670 TAS phagocytic vesicle membrane
GO:0042605 IEA peptide antigen binding
GO:0042612 IEA MHC class I protein complex
GO:0048839 IDA inner ear development
GO:0071556 TAS integral component of lumenal side of endoplasmic reticulum membrane

Homologs

No Homologs available.

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