C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histocompatibility 2, Q region locus 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000067235 H2-Q10 10090 + 17:35470089-35474563 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068291 H2-Q10-201 35470089-35474563 protein_coding
  ENSMUST00000174525 H2-Q10-001 35470089-35474563 protein_coding
  ENSMUST00000174589 H2-Q10-002 35470097-35474551 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068291ENSMUST00000174589
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068291 22.532±6.27 20.701±2.01 N/A 0.036±0.01 84.453±2.96 2.034±0.61 1.320±0.77 2.513±0.66 790.116±614.74 3.579±0.34 N/A 8.953±3.62 15.185±10.38 0.066±0.00
ENSMUST00000174589 4.798±0.96 1.691±0.60 1.195±0.31 0.042±0.00 10.875±2.58 2.537±0.47 1.625±0.00 1.226±0.10 49.149±31.67 4.925±0.86 0.274±0.08 2.723±1.63 1.403±1.59 0.015±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0002 VISTA 17:35419853-36021785

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001916 IEA positive regulation of T cell mediated cytotoxicity
GO:0002474 IEA antigen processing and presentation of peptide antigen via MHC class I
GO:0006955 IEA immune response
GO:0030670 TAS phagocytic vesicle membrane
GO:0042605 IEA peptide antigen binding
GO:0042612 IEA MHC class I protein complex
GO:0071556 TAS integral component of lumenal side of endoplasmic reticulum membrane

Homologs

No Homologs available.

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