C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S28
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000067288 Rps28 10090 - 17:33819027-33824562 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000087342 Rps28-002 33823036-33824562 protein_coding
  ENSMUST00000166693 Rps28-005 33823052-33824476 protein_coding
  ENSMUST00000173019 Rps28-007 33819027-33824492 protein_coding
  ENSMUST00000173480 Rps28-003 33823050-33824465 processed_transcript
  ENSMUST00000173844 Rps28-001 33823050-33824562 protein_coding
  ENSMUST00000173879 Rps28-006 33823037-33824346 protein_coding
  ENSMUST00000174788 Rps28-004 33823586-33824484 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000087342ENSMUST00000166693ENSMUST00000173019ENSMUST00000173844
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000087342 81.743±0.00 N/A 142.781±0.00 78.725±0.00 N/A 52.863±0.00 N/A N/A 148.728±34.01 38.391±2.48 229.997±55.52 303.020±76.73 N/A
ENSMUST00000166693 310.057±45.82 N/A 1354.500±62.94 442.995±228.18 510.576±93.58 510.055±183.58 301.332±124.80 522.535±109.79 447.809±282.03 150.894±52.23 582.301±126.96 797.816±337.32 437.774±113.89
ENSMUST00000173019 N/A N/A N/A N/A N/A N/A N/A N/A 98.388±9.97 N/A N/A N/A N/A
ENSMUST00000173844 243.011±14.50 182.209±15.63 309.118±27.13 176.207±40.27 124.894±6.15 209.353±71.54 N/A 122.657±9.63 235.922±163.42 140.818±17.99 403.031±215.10 477.326±385.96 185.291±19.34

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IBA structural constituent of ribosome
GO:0006407 IBA rRNA export from nucleus
GO:0006412 IEA translation
GO:0022627 IBA cytosolic small ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035860 rps28 ribosomal protein S28 protein_coding Danio_rerio

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