C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA D430041D05 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000068373 D430041D05Rik 10090 - 2:104143073-104410334 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000089726 D430041D05Rik-201 104143073-104410334 protein_coding
  ENSMUST00000136156 D430041D05Rik-001 104147047-104230568 retained_intron
  ENSMUST00000139015 D430041D05Rik-006 104255416-104409993 protein_coding
  ENSMUST00000141159 D430041D05Rik-002 104143073-104257400 protein_coding
  ENSMUST00000149165 D430041D05Rik-004 104207666-104257984 retained_intron
  ENSMUST00000149466 D430041D05Rik-007 104255123-104409992 protein_coding
  ENSMUST00000155458 D430041D05Rik-005 104152180-104158419 retained_intron
  ENSMUST00000156278 D430041D05Rik-003 104184987-104241183 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089726ENSMUST00000136156ENSMUST00000141159ENSMUST00000149165ENSMUST00000149466ENSMUST00000155458ENSMUST00000156278
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089726 0.136±0.00 2.359±0.58 0.004±0.00 4.809±0.00 0.074±0.03 N/A 0.010±0.00 0.011±0.01 0.003±0.00 0.381±0.00 0.184±0.04 0.157±0.06 0.021±0.00 0.031±0.02
ENSMUST00000136156 0.110±0.08 N/A 0.007±0.00 N/A 0.052±0.02 0.013±0.00 N/A 0.026±0.01 0.001±0.00 0.556±0.11 0.615±0.23 0.162±0.03 0.347±0.34 0.008±0.00
ENSMUST00000141159 N/A N/A N/A N/A 0.069±0.05 0.009±0.00 N/A 0.013±0.00 0.018±0.00 N/A 0.188±0.03 0.128±0.06 0.016±0.00 N/A
ENSMUST00000149165 N/A N/A N/A N/A N/A 0.018±0.00 N/A 0.015±0.00 0.001±0.00 N/A 0.296±0.00 0.136±0.07 N/A 0.034±0.01
ENSMUST00000149466 N/A N/A N/A N/A N/A N/A 0.125±0.05 0.079±0.00 0.096±0.00 N/A N/A 0.715±0.00 N/A 0.286±0.00
ENSMUST00000155458 N/A N/A N/A N/A N/A N/A 0.011±0.00 0.033±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000156278 N/A N/A 0.021±0.00 N/A N/A 0.022±0.00 0.023±0.00 0.029±0.00 0.011±0.01 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000929 CIL_000929_0002 VISTA 2:103593010-104195664

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062086 kiaa1549lb KIAA1549-like b protein_coding Danio_rerio
ENSDARG00000062477 kiaa1549la KIAA1549-like a protein_coding Danio_rerio
ENSDARG00000087114 protein_coding Danio_rerio
ENSG00000110427 KIAA1549L KIAA1549-like protein_coding Homo_sapiens

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