C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: expressed sequence C78339
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000069237 C78339 10090 + 13:46669522-46678056 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000099547 C78339-001 46669522-46678056 protein_coding
  ENSMUST00000150376 C78339-002 46671191-46673814 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099547ENSMUST00000150376
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099547 15.748±1.23 19.511±9.41 24.451±0.68 19.530±7.92 10.252±3.85 12.691±8.27 5.762±0.24 12.989±1.62 8.996±2.22 15.131±3.57 7.282±1.18 12.069±8.40 12.162±3.64 11.545±5.21
ENSMUST00000150376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.694±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009C9 CIL_0009C9_0002 VISTA 13:46271320-46874349
CIL_0008JF CIL_0008JF_0002 VISTA 13:46271337-46874342
CIL_0008B7 CIL_0008B7_0002 VISTA 13:46332291-46935792
CIL_00081D CIL_00081D_0002 VISTA 13:46435395-47036634
CIL_0003RP CIL_0003RP_0002 CGP 13:46501848-46678056
CIL_00090E CIL_00090E_0002 VISTA 13:46584783-47186478
CIL_0003RM CIL_0003RM_0002 CGP 13:46669522-46727940

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004308 fam8a1 family with sequence similarity 8, member A1 protein_coding Danio_rerio
ENSDARG00000017111 FAM8A1 (2 of 3) family with sequence similarity 8, member A1 protein_coding Danio_rerio
ENSDARG00000088455 FAM8A1 (3 of 3) family with sequence similarity 8, member A1 protein_coding Danio_rerio
ENSG00000137414 FAM8A1 family with sequence similarity 8, member A1 protein_coding Homo_sapiens

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