C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pregnancy-specific glycoprotein 21
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000070796 Psg21 10090 - 7:18646736-18656725 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000094793 Psg21-001 18646736-18656722 protein_coding
  ENSMUST00000182128 Psg21-002 18649947-18656722 protein_coding
  ENSMUST00000182228 Psg21-003 18651720-18656725 retained_intron
  ENSMUST00000182933 Psg21-004 18652489-18656699 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonLiverPlacentaENSMUST00000094793ENSMUST00000182128ENSMUST00000182228ENSMUST00000182933
Transcript ID Bladder Brain Colon Liver Placenta
ENSMUST00000094793 0.007±0.00 0.036±0.01 0.030±0.00 0.125±0.17 871.709±1125.33
ENSMUST00000182128 N/A N/A 0.032±0.00 N/A N/A
ENSMUST00000182228 N/A N/A 0.049±0.00 N/A N/A
ENSMUST00000182933 N/A N/A N/A N/A 1456.560±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UJ CIL_0003UJ_0016 CGP 7:18606343-18656725
CIL_0003UJ CIL_0003UJ_0011 CGP 7:18646736-18686185

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0007565 IEA female pregnancy
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041119 ceacam1 carcinoembryonic antigen-related cell adhesion molecule 1 protein_coding Danio_rerio
ENSDARG00000076981 zgc:198329 zgc:198329 protein_coding Danio_rerio
ENSDARG00000078177 cxcr3.1 chemokine (C-X-C motif) receptor 3, tandem duplicate 1 protein_coding Danio_rerio
ENSDARG00000079372 si:ch211-264f5.6 si:ch211-264f5.6 protein_coding Danio_rerio
ENSDARG00000092520 si:dkey-250k15.10 si:dkey-250k15.10 protein_coding Danio_rerio
ENSDARG00000093279 si:dkey-11o1.3 si:dkey-11o1.3 protein_coding Danio_rerio
ENSDARG00000095048 si:dkey-250k15.7 si:dkey-250k15.7 protein_coding Danio_rerio
ENSDARG00000095134 si:dkey-250k15.9 si:dkey-250k15.9 protein_coding Danio_rerio
ENSDARG00000095772 si:dkey-11o1.2 si:dkey-11o1.2 protein_coding Danio_rerio
ENSG00000105352 CEACAM4 carcinoembryonic antigen-related cell adhesion molecule 4 protein_coding Homo_sapiens
ENSG00000170956 CEACAM3 carcinoembryonic antigen-related cell adhesion molecule 3 protein_coding Homo_sapiens

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