C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: selection and upkeep of intraepithelial T cells 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000070868 Skint3 10090 + 4:112232245-112300468 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038455 Skint3-001 112232245-112300468 protein_coding
  ENSMUST00000170945 Skint3-201 112232245-112300468 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038455ENSMUST00000170945
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038455 0.094±0.04 0.007±0.00 0.100±0.00 0.032±0.02 0.069±0.02 0.017±0.01 0.204±0.03 0.023±0.01 0.069±0.01 0.010±0.00 0.049±0.02
ENSMUST00000170945 N/A N/A 0.348±0.05 N/A N/A N/A 0.280±0.00 0.047±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XH CIL_0000XH_000C CGP 4:112072016-112300468

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004109 CR846080.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000039257 si:ch73-137d22.1 si:ch73-137d22.1 protein_coding Danio_rerio
ENSDARG00000056798 zgc:123297 zgc:123297 protein_coding Danio_rerio
ENSDARG00000079170 zgc:162154 zgc:162154 protein_coding Danio_rerio

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