C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dystrobrevin, beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000071454 Dtnb 10090 + 12:3572381-3781796 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000077930 Dtnb-014 3572984-3781391 protein_coding
  ENSMUST00000101637 Dtnb-013 3572523-3781505 nonsense_mediated_decay
  ENSMUST00000164578 Dtnb-001 3572391-3781398 protein_coding
  ENSMUST00000164607 Dtnb-004 3572433-3781398 nonsense_mediated_decay
  ENSMUST00000168806 Dtnb-006 3572435-3721089 retained_intron
  ENSMUST00000172504 Dtnb-021 3749289-3781142 retained_intron
  ENSMUST00000172598 Dtnb-016 3632922-3781395 protein_coding
  ENSMUST00000172735 Dtnb-025 3774315-3781398 processed_transcript
  ENSMUST00000173074 Dtnb-019 3686756-3718968 retained_intron
  ENSMUST00000173199 Dtnb-002 3572381-3781796 protein_coding
  ENSMUST00000173240 Dtnb-007 3572453-3781395 protein_coding
  ENSMUST00000173483 Dtnb-003 3572417-3781359 nonsense_mediated_decay
  ENSMUST00000173498 Dtnb-020 3719540-3749474 processed_transcript
  ENSMUST00000173524 Dtnb-010 3572466-3663242 processed_transcript
  ENSMUST00000173542 Dtnb-023 3749543-3781398 protein_coding
  ENSMUST00000173736 Dtnb-012 3572475-3781395 protein_coding
  ENSMUST00000173998 Dtnb-018 3572536-3596852 protein_coding
  ENSMUST00000174109 Dtnb-015 3572620-3751903 nonsense_mediated_decay
  ENSMUST00000174290 Dtnb-009 3572465-3781393 nonsense_mediated_decay
  ENSMUST00000174293 Dtnb-024 3779548-3781398 retained_intron
  ENSMUST00000174414 Dtnb-022 3774525-3781397 retained_intron
  ENSMUST00000174479 Dtnb-005 3572434-3646787 protein_coding
  ENSMUST00000174547 Dtnb-017 3589172-3781395 protein_coding
  ENSMUST00000174639 Dtnb-008 3572463-3781142 nonsense_mediated_decay
  ENSMUST00000174663 Dtnb-011 3572470-3781395 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000077930ENSMUST00000101637ENSMUST00000164578ENSMUST00000164607ENSMUST00000172598ENSMUST00000173199ENSMUST00000173240ENSMUST00000173483ENSMUST00000173542ENSMUST00000174109ENSMUST00000174290ENSMUST00000174479ENSMUST00000174639
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077930 1.212±0.47 N/A 2.717±0.62 N/A 2.334±0.66 N/A 0.765±0.00 4.571±1.19 4.789±1.57 3.339±0.74 N/A 5.809±1.34 3.748±0.14 15.060±1.31
ENSMUST00000101637 0.336±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164578 N/A N/A N/A N/A N/A N/A 0.281±0.00 N/A N/A N/A N/A 4.832±0.96 N/A N/A
ENSMUST00000164607 2.923±0.10 8.005±1.41 3.147±0.13 4.719±0.00 2.712±0.78 1.887±0.62 0.586±0.24 10.801±1.36 5.817±1.30 4.002±0.21 0.335±0.01 6.678±1.43 4.302±0.43 32.958±1.43
ENSMUST00000172598 1.047±0.12 N/A N/A N/A 2.109±0.00 1.245±0.00 N/A N/A N/A N/A N/A 10.311±2.14 N/A N/A
ENSMUST00000173199 1.252±0.00 N/A 1.498±0.00 N/A N/A 1.010±0.32 N/A N/A N/A N/A 0.299±0.04 3.501±0.51 N/A N/A
ENSMUST00000173240 N/A N/A N/A 4.263±0.17 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173483 N/A 4.557±1.20 N/A 13.038±0.00 2.063±0.00 0.811±0.06 N/A N/A 2.599±0.00 N/A N/A 7.040±0.00 3.792±0.65 4.397±0.00
ENSMUST00000173542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.049±0.00 N/A N/A N/A
ENSMUST00000174109 3.230±0.00 N/A N/A 16.662±0.00 3.514±0.93 1.557±0.24 0.902±0.00 7.527±0.21 5.346±0.52 4.465±0.48 0.782±0.24 7.772±1.43 5.208±1.95 14.823±2.29
ENSMUST00000174290 2.217±0.00 5.185±0.93 N/A N/A 2.275±0.53 1.662±0.57 N/A 5.316±1.84 3.576±1.01 3.086±0.00 N/A 7.549±2.70 3.538±1.30 10.005±0.00
ENSMUST00000174479 0.499±0.19 N/A N/A N/A 1.057±0.00 1.052±0.00 0.203±0.01 N/A N/A N/A 0.173±0.00 N/A 0.282±0.00 N/A
ENSMUST00000174639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.674±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0045202 IDA synapse

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013020 dtnbb dystrobrevin, beta b protein_coding Danio_rerio
ENSG00000138101 DTNB dystrobrevin, beta protein_coding Homo_sapiens

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