C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1810009A15 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000071653 1810009A15Rik 10090 + 19:8888853-8890881 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000096251 1810009A15Rik-001 8888853-8890881 protein_coding
  ENSMUST00000185488 1810009A15Rik-004 8888915-8890546 nonsense_mediated_decay
  ENSMUST00000186647 1810009A15Rik-003 8888899-8890746 retained_intron
  ENSMUST00000187037 1810009A15Rik-006 8888929-8890465 retained_intron
  ENSMUST00000190843 1810009A15Rik-005 8888939-8890741 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000096251ENSMUST00000185488
Transcript ID Adipose Bladder Brain Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000096251 9.897±0.00 25.965±4.01 10.662±5.68 5.678±0.13 11.779±1.79 33.833±22.48 7.045±0.67 18.108±3.12 33.818±18.48 21.429±9.15
ENSMUST00000185488 N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.880±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0002 VISTA 19:8644197-9245760

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000255432 RP11-831H9.11 Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000435188} protein_coding Homo_sapiens
ENSG00000278615 C11orf48 chromosome 11 open reading frame 98 protein_coding Homo_sapiens

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