C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sphingomyelin phosphodiesterase 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000071724 Smpd5 10090 + 15:76294434-76296896 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000096370 Smpd5-003 76295251-76296893 retained_intron
  ENSMUST00000163991 Smpd5-001 76294434-76296896 protein_coding
  ENSMUST00000167433 Smpd5-004 76295309-76295873 retained_intron
  ENSMUST00000171192 Smpd5-002 76294968-76296252 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000096370ENSMUST00000163991ENSMUST00000167433
Transcript ID Testis
ENSMUST00000096370 68.181±4.36
ENSMUST00000163991 67.221±2.44
ENSMUST00000167433 173.676±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0002 VISTA 15:76102685-76704351

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004767 IDA sphingomyelin phosphodiesterase activity
GO:0005739 IDA mitochondrion
GO:0006672 IDA ceramide metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059811 smpd5 sphingomyelin phosphodiesterase 5 protein_coding Danio_rerio

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