C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin XVIIIb
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000072720 Myo18b 10090 - 5:112688876-112896362 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000086617 Myo18b-002 112688876-112896362 protein_coding
  ENSMUST00000182189 Myo18b-003 112688878-112765931 processed_transcript
  ENSMUST00000183029 Myo18b-001 112772886-112871586 processed_transcript
  ENSMUST00000183273 Myo18b-004 112817226-112872496 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000086617ENSMUST00000182189ENSMUST00000183029ENSMUST00000183273
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000086617 0.109±0.08 0.030±0.00 0.514±0.03 0.148±0.00 2.799±0.13 0.109±0.05 13.860±1.71 0.075±0.06 0.011±0.01 0.705±0.59 42.550±3.95 0.079±0.03 0.225±0.10 N/A
ENSMUST00000182189 0.089±0.10 0.043±0.02 0.594±0.23 0.310±0.15 1.427±1.67 0.177±0.03 12.526±0.58 0.050±0.05 0.041±0.03 0.424±0.07 19.244±2.16 0.144±0.07 0.252±0.15 15.951±5.63
ENSMUST00000183029 N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A N/A 0.056±0.02 0.064±0.00 N/A
ENSMUST00000183273 N/A 0.025±0.01 N/A N/A 0.053±0.02 0.207±0.11 N/A 0.013±0.01 0.011±0.01 N/A N/A 0.147±0.07 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001570 IMP vasculogenesis
GO:0001701 IMP in utero embryonic development
GO:0003674 ND molecular_function
GO:0003774 IEA motor activity
GO:0005524 IEA ATP binding
GO:0008152 IEA metabolic process
GO:0016459 IEA myosin complex
GO:0030018 IDA Z disc
GO:0031941 IDA filamentous actin
GO:0048739 IMP cardiac muscle fiber development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086662 myosin XVIIIB protein_coding Danio_rerio
ENSDARG00000089630 CABZ01087088.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090163 MYO18B (2 of 3) myosin XVIIIB protein_coding Danio_rerio
ENSDARG00000091350 CABZ01073112.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000133454 MYO18B myosin XVIIIB protein_coding Homo_sapiens

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