C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: basic helix-loop-helix domain containing, class B9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000072964 Bhlhb9 10090 + X:135885851-135891081 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068755 Bhlhb9-001 135885853-135891081 protein_coding
  ENSMUST00000148374 Bhlhb9-002 135885853-135889326 protein_coding
  ENSMUST00000151989 Bhlhb9-003 135885983-135887470 retained_intron
  ENSMUST00000180025 Bhlhb9-201 135885851-135891078 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068755ENSMUST00000148374ENSMUST00000151989ENSMUST00000180025
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068755 0.567±0.00 N/A 0.676±0.00 2.761±0.00 0.398±0.13 0.351±0.00 0.622±0.00 0.231±0.08 0.721±0.33 0.366±0.00 0.228±0.02 0.774±0.15 0.972±0.18 0.209±0.08
ENSMUST00000148374 N/A 2.469±0.47 N/A 6.452±0.00 0.817±0.32 0.748±0.17 N/A 1.042±0.04 0.851±0.66 0.994±0.53 0.441±0.00 3.908±2.17 2.695±0.74 1.269±0.50
ENSMUST00000151989 N/A N/A N/A N/A N/A 0.424±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180025 3.031±1.76 0.944±0.49 5.549±0.76 17.397±3.82 1.306±0.22 0.467±0.20 1.891±0.40 1.311±0.33 2.622±2.35 1.184±0.55 0.722±0.24 3.559±2.98 5.048±1.46 0.875±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037H CIL_00037H_0002 CGP X:135839034-135891081

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0007611 IDA learning or memory
GO:0042803 IDA protein homodimerization activity
GO:0043524 IDA negative regulation of neuron apoptotic process
GO:0050769 IDA positive regulation of neurogenesis
GO:0051965 IDA positive regulation of synapse assembly
GO:0061003 IDA positive regulation of dendritic spine morphogenesis
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062960 ARMCX3 armadillo repeat containing, X-linked 3 protein_coding Danio_rerio
ENSG00000198908 BHLHB9 basic helix-loop-helix domain containing, class B, 9 protein_coding Homo_sapiens

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