C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histocompatibility 2, D region locus 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000073411 H2-D1 10090 + 17:35262730-35267499 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000172503 H2-D1-004 35266021-35266889 protein_coding
  ENSMUST00000172785 H2-D1-001 35262730-35267499 protein_coding
  ENSMUST00000173167 H2-D1-003 35266021-35266889 protein_coding
  ENSMUST00000174325 H2-D1-005 35265477-35266319 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172785ENSMUST00000173167
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172785 801.516±363.35 294.966±44.92 183.709±98.49 9.554±3.28 911.363±150.99 409.797±60.79 96.031±30.05 149.899±2.94 156.312±106.37 516.072±132.96 35.962±11.29 167.405±49.15 134.677±88.04 11.519±5.39
ENSMUST00000173167 N/A N/A N/A 19.110±0.00 N/A N/A N/A N/A N/A N/A N/A 309.022±0.00 297.434±12.07 23.499±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001916 IDA positive regulation of T cell mediated cytotoxicity
GO:0002485 IDA antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0006955 IEA immune response
GO:0009897 IDA external side of plasma membrane
GO:0030670 TAS phagocytic vesicle membrane
GO:0042605 IEA peptide antigen binding
GO:0042612 IEA MHC class I protein complex
GO:0071556 TAS integral component of lumenal side of endoplasmic reticulum membrane

Homologs

No Homologs available.

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