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Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: alcohol dehydrogenase 1 (class I)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000074207 Adh1 10090 + 3:138260991-138290698 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000004232 Adh1-001 138277494-138290698 protein_coding
  ENSMUST00000159159 Adh1-004 138277651-138290698 nonsense_mediated_decay
  ENSMUST00000161799 Adh1-003 138277645-138280952 retained_intron
  ENSMUST00000162032 Adh1-002 138260991-138282781 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004232ENSMUST00000159159
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004232 95.417±22.81 928.731±289.08 345.874±43.82 0.352±0.11 26.594±1.99 206.932±55.12 7.325±1.55 72.843±6.69 699.335±539.56 35.449±5.68 9.966±2.90 92.010±23.52 13.289±17.92 3.880±2.42
ENSMUST00000159159 42.439±3.91 976.155±372.20 N/A 0.228±0.00 23.699±7.14 171.006±32.88 3.909±1.46 46.208±7.32 584.967±101.48 31.218±0.71 2.124±0.68 83.536±35.02 0.984±0.72 0.858±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005C1 CIL_0005C1_0009 CGP 3:138217823-138290698
CIL_0005C1 CIL_0005C1_000B CGP 3:138260991-138331134

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001523 IMP retinoid metabolic process
GO:0004022 TAS alcohol dehydrogenase (NAD) activity
GO:0005622 IDA intracellular
GO:0005739 IDA mitochondrion
GO:0006068 IMP ethanol catabolic process
GO:0008270 IEA zinc ion binding
GO:0032526 IDA response to retinoic acid
GO:0033574 IDA response to testosterone
GO:0042572 IMP retinol metabolic process
GO:0042573 IMP retinoic acid metabolic process
GO:0042803 IPI protein homodimerization activity
GO:0048149 IMP behavioral response to ethanol
GO:0048545 IDA response to steroid hormone
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024278 adh8b alcohol dehydrogenase 8b protein_coding Danio_rerio
ENSDARG00000087262 zgc:63568 zgc:63568 protein_coding Danio_rerio
ENSDARG00000088366 zgc:77938 zgc:77938 protein_coding Danio_rerio
ENSDARG00000091211 adh8a alcohol dehydrogenase 8a protein_coding Danio_rerio
ENSG00000187758 ADH1A alcohol dehydrogenase 1A (class I), alpha polypeptide protein_coding Homo_sapiens
ENSG00000196616 ADH1B alcohol dehydrogenase 1B (class I), beta polypeptide protein_coding Homo_sapiens
ENSG00000248144 ADH1C alcohol dehydrogenase 1C (class I), gamma polypeptide protein_coding Homo_sapiens

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