C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1500012F01 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000074578 1500012F01Rik 10090 + 2:167062934-167065862 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000125674 1500012F01Rik-201 167062934-167065861 protein_coding
  ENSMUST00000125841 1500012F01Rik-003 167063223-167065722 retained_intron
  ENSMUST00000136378 1500012F01Rik-002 167063221-167065382 retained_intron
  ENSMUST00000143587 1500012F01Rik-005 167063649-167065862 retained_intron
  ENSMUST00000145859 1500012F01Rik-004 167062935-167065574 retained_intron
  ENSMUST00000189909 1500012F01Rik-001 167062934-167065862 antisense

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverMuscleOvaryPlacentaENSMUST00000125674ENSMUST00000145859ENSMUST00000189909
Transcript ID Bladder Brain Breast Liver Muscle Ovary Placenta
ENSMUST00000125674 35.461±0.98 36.808±14.45 N/A 85.558±33.91 15.604±0.75 109.348±32.91 20.397±0.65
ENSMUST00000145859 4.575±0.00 6.592±0.00 7.106±0.00 8.835±0.88 N/A N/A 5.620±1.66
ENSMUST00000189909 N/A N/A N/A N/A N/A 74.684±0.00 33.587±7.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000279 CIL_000279_0002 CGP 2:167015193-167063015
CIL_0008I4 CIL_0008I4_0002 VISTA 2:167024358-167627099

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

No Homologs available.

Loading