C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: selenoprotein M
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000075702 Selm 10090 + 11:3514684-3517351 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000094469 Selm-001 3514867-3517351 protein_coding
  ENSMUST00000123677 Selm-002 3514684-3517348 processed_transcript
  ENSMUST00000131865 Selm-003 3514702-3517130 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094469ENSMUST00000131865
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094469 92.829±49.74 47.758±10.91 132.286±13.33 38.615±10.70 54.490±24.15 249.574±31.40 31.035±4.98 65.624±8.46 6.190±3.80 56.038±8.34 9.788±1.76 116.987±29.57 40.943±21.55 6.725±3.23
ENSMUST00000131865 N/A N/A N/A N/A N/A N/A N/A N/A 0.456±0.00 N/A N/A 1.484±0.00 1.118±0.43 0.099±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000508 CIL_000508_0002 CGP 11:3494375-3517351
CIL_0000NL CIL_0000NL_0002 CGP 11:3514684-3540612

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0010269 IMP response to selenium ion
GO:0035264 IMP multicellular organism growth
GO:0035934 IMP corticosterone secretion
GO:0042445 IMP hormone metabolic process
GO:0060612 IMP adipose tissue development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000051957 selm selenoprotein M protein_coding Danio_rerio
ENSG00000198832 SELM selenoprotein M precursor protein_coding Homo_sapiens

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