C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA C030017K20 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000078490 C030017K20Rik 10090 + 4:155409190-155466823 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000050128 C030017K20Rik-002 155421906-155447944 retained_intron
  ENSMUST00000094408 C030017K20Rik-001 155409258-155443108 processed_transcript
  ENSMUST00000105619 C030017K20Rik-201 155451570-155466405 protein_coding
  ENSMUST00000123952 C030017K20Rik-003 155409258-155421992 protein_coding
  ENSMUST00000129481 C030017K20Rik-004 155409190-155415987 retained_intron
  ENSMUST00000135407 C030017K20Rik-007 155451570-155466405 retained_intron
  ENSMUST00000144157 C030017K20Rik-009 155461890-155466530 retained_intron
  ENSMUST00000144625 C030017K20Rik-008 155461937-155466480 retained_intron
  ENSMUST00000151083 C030017K20Rik-006 155409258-155466823 protein_coding
  ENSMUST00000165947 C030017K20Rik-005 155429868-155447777 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050128ENSMUST00000094408ENSMUST00000105619ENSMUST00000123952ENSMUST00000129481ENSMUST00000135407ENSMUST00000144157ENSMUST00000144625ENSMUST00000151083ENSMUST00000165947
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050128 N/A 0.156±0.00 N/A N/A 0.128±0.00 0.616±0.00 N/A N/A 0.047±0.04 N/A 0.097±0.00 1.238±0.00 N/A 11.871±0.00
ENSMUST00000094408 N/A N/A N/A 2.539±0.00 N/A N/A N/A N/A 0.037±0.01 N/A N/A 0.977±0.00 N/A 47.605±0.00
ENSMUST00000105619 N/A 0.138±0.00 N/A N/A 0.107±0.00 N/A N/A N/A N/A N/A N/A 1.174±0.00 N/A N/A
ENSMUST00000123952 N/A N/A N/A 0.776±0.29 0.251±0.09 N/A 0.164±0.00 0.178±0.04 0.099±0.11 N/A 0.233±0.10 N/A 0.389±0.12 N/A
ENSMUST00000129481 N/A 1.291±0.00 N/A N/A N/A N/A N/A N/A 0.172±0.04 N/A N/A N/A N/A N/A
ENSMUST00000135407 0.866±0.00 0.357±0.00 N/A N/A N/A N/A N/A N/A N/A 1.508±0.23 N/A 1.661±0.48 N/A 13.181±0.00
ENSMUST00000144157 N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.01 N/A N/A 0.787±0.00 N/A N/A
ENSMUST00000144625 N/A 0.103±0.00 N/A N/A 0.125±0.00 N/A 0.134±0.00 N/A N/A N/A 0.221±0.07 0.875±0.05 N/A 10.046±0.00
ENSMUST00000151083 N/A 0.081±0.00 0.322±0.05 0.319±0.03 0.066±0.00 0.193±0.11 0.109±0.03 0.056±0.02 0.017±0.00 0.940±0.00 0.093±0.02 1.344±0.76 N/A 14.705±4.61
ENSMUST00000165947 N/A N/A N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QV CIL_0007QV_0002 VISTA 4:154934679-155536167

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075917 si:dkeyp-87a12.1 cilia and flagella associated protein 74 protein_coding Danio_rerio
ENSG00000142609 KIAA1751 cilia and flagella associated protein 74 protein_coding Homo_sapiens

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