C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1110065P20 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000078570 1110065P20Rik 10090 - 4:124849080-124851196 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000106190 1110065P20Rik-001 124849485-124850809 protein_coding
  ENSMUST00000125776 1110065P20Rik-002 124849486-124850661 protein_coding
  ENSMUST00000137769 1110065P20Rik-003 124849546-124850473 protein_coding
  ENSMUST00000163946 1110065P20Rik-201 124849485-124850730 protein_coding
  ENSMUST00000184704 1110065P20Rik-005 124849080-124850330 retained_intron
  ENSMUST00000185036 1110065P20Rik-004 124849490-124851196 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000125776ENSMUST00000137769ENSMUST00000163946ENSMUST00000184704
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000125776 N/A N/A N/A N/A N/A 13.200±0.00 9.708±1.52 16.122±2.45 27.343±0.00 N/A N/A
ENSMUST00000137769 21.549±0.70 42.851±8.59 24.047±0.25 N/A 13.978±0.00 21.713±3.55 20.169±0.00 N/A 34.433±0.70 N/A 103.619±4.27
ENSMUST00000163946 N/A 27.199±0.00 N/A 16.679±0.49 N/A 13.504±0.70 11.926±1.55 16.035±0.00 30.525±0.00 19.004±0.30 N/A
ENSMUST00000184704 N/A N/A N/A N/A N/A N/A N/A N/A 6.830±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NZ CIL_0008NZ_0002 VISTA 4:124251046-124852185
CIL_0007UI CIL_0007UI_0002 VISTA 4:124315408-124916812
CIL_00095Y CIL_00095Y_0002 VISTA 4:124371949-124972943
CIL_0002SC CIL_0002SC_0002 CGP 4:124741850-124849800

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000197982 C1orf122 chromosome 1 open reading frame 122 protein_coding Homo_sapiens

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