C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, H+ transporting, lysosomal accessory protein 1-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000078958 Atp6ap1l 10090 - 13:90883433-90905355 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000109541 Atp6ap1l-001 90883439-90905355 protein_coding
  ENSMUST00000182104 Atp6ap1l-005 90883453-90898824 protein_coding
  ENSMUST00000182446 Atp6ap1l-003 90883439-90905307 nonsense_mediated_decay
  ENSMUST00000182932 Atp6ap1l-002 90898756-90905335 processed_transcript
  ENSMUST00000183162 Atp6ap1l-004 90883433-90899813 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000109541ENSMUST00000182104ENSMUST00000182446
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000109541 N/A N/A 1.900±2.22 N/A N/A N/A N/A N/A N/A 0.537±0.13 N/A N/A
ENSMUST00000182104 N/A N/A 5.951±0.00 N/A 0.101±0.00 0.340±0.00 0.056±0.01 0.014±0.00 0.062±0.00 0.856±0.59 0.024±0.00 N/A
ENSMUST00000182446 0.061±0.03 0.090±0.00 N/A 0.086±0.01 0.074±0.00 0.536±0.24 0.045±0.02 0.047±0.03 N/A 1.151±0.50 0.033±0.01 59.940±43.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZT CIL_0002ZT_0002 CGP 13:90883433-90924942

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0033180 IEA proton-transporting V-type ATPase, V1 domain
GO:0046933 IEA proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 IEA proton-transporting ATPase activity, rotational mechanism

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090963 ATP6AP1L (1 of 2) ATPase, H+ transporting, lysosomal accessory protein 1-like protein_coding Danio_rerio
ENSDARG00000091509 ATP6AP1L (2 of 2) ATPase, H+ transporting, lysosomal accessory protein 1-like protein_coding Danio_rerio
ENSG00000205464 ATP6AP1L ATPase, H+ transporting, lysosomal accessory protein 1-like protein_coding Homo_sapiens

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