C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 3110007F17 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000079450 3110007F17Rik 10090 + X:123103495-123188795 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000113343 3110007F17Rik-002 123103495-123145651 protein_coding
  ENSMUST00000113348 3110007F17Rik-001 123103559-123145654 protein_coding
  ENSMUST00000139733 3110007F17Rik-005 123103568-123143082 processed_transcript
  ENSMUST00000149445 3110007F17Rik-004 123103554-123188795 processed_transcript
  ENSMUST00000153946 3110007F17Rik-003 123103535-123146987 processed_transcript
  ENSMUST00000169445 3110007F17Rik-201 123117567-123143270 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113343ENSMUST00000113348ENSMUST00000139733ENSMUST00000149445ENSMUST00000153946ENSMUST00000169445
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113343 0.753±0.17 0.300±0.21 1.191±0.07 2.869±2.02 0.411±0.07 0.101±0.02 0.213±0.11 0.279±0.08 0.646±0.31 0.671±0.11 0.096±0.03 0.860±0.38 0.227±0.21 0.253±0.02
ENSMUST00000113348 N/A 0.243±0.17 N/A 0.014±0.00 0.315±0.17 0.125±0.00 N/A 0.076±0.00 0.073±0.04 N/A 0.087±0.02 0.447±0.18 0.036±0.00 0.262±0.02
ENSMUST00000139733 0.559±0.08 0.354±0.00 N/A N/A 0.367±0.14 N/A 0.354±0.04 0.337±0.11 0.499±0.00 0.458±0.00 N/A 1.155±0.43 N/A 0.673±0.10
ENSMUST00000149445 N/A N/A N/A N/A N/A 0.192±0.00 N/A N/A 0.054±0.01 N/A 0.027±0.00 N/A 0.148±0.01 0.048±0.00
ENSMUST00000153946 N/A N/A 0.646±0.00 0.254±0.00 0.423±0.00 0.115±0.00 N/A N/A 0.478±0.13 N/A 0.072±0.02 0.985±0.28 0.256±0.06 0.171±0.03
ENSMUST00000169445 N/A N/A N/A N/A 0.332±0.00 0.159±0.00 N/A N/A 0.146±0.03 N/A N/A 0.674±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005198 IEA structural molecule activity
GO:0005575 ND cellular_component
GO:0005923 IEA tight junction
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054342 CABZ01080074.1 Claudin protein_coding Danio_rerio
ENSDARG00000087805 CABZ01007930.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000234469 AC002365.5 uncharacterized protein LOC100288814 protein_coding Homo_sapiens

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