C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin-like 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000084786 Ubl5 10090 + 9:20642878-20647140 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000129414 Ubl5-001 20643318-20646964 protein_coding
  ENSMUST00000154429 Ubl5-002 20642878-20646775 retained_intron
  ENSMUST00000160124 Ubl5-009 20645041-20646775 protein_coding
  ENSMUST00000160682 Ubl5-012 20644071-20646777 protein_coding
  ENSMUST00000160874 Ubl5-007 20644835-20646775 nonsense_mediated_decay
  ENSMUST00000161486 Ubl5-005 20644834-20647140 protein_coding
  ENSMUST00000161595 Ubl5-006 20644834-20645906 retained_intron
  ENSMUST00000161834 Ubl5-011 20645218-20646776 protein_coding
  ENSMUST00000161882 Ubl5-008 20644868-20646769 protein_coding
  ENSMUST00000161887 Ubl5-003 20644340-20645649 protein_coding
  ENSMUST00000162303 Ubl5-004 20644821-20646775 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000129414ENSMUST00000154429ENSMUST00000160682ENSMUST00000161887
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000129414 3.850±0.00 N/A 6.577±2.99 6.553±0.00 N/A N/A N/A N/A N/A N/A 5.814±2.00 4.371±0.11 10.961±0.57
ENSMUST00000154429 4.342±0.58 N/A 6.077±0.24 7.834±2.59 8.049±0.42 5.829±0.96 N/A 4.423±0.31 10.674±1.56 N/A 8.207±1.76 5.288±0.00 9.185±1.71
ENSMUST00000160682 41.932±1.45 131.238±6.89 94.286±34.65 46.797±4.20 69.246±16.98 70.186±4.73 142.200±27.95 130.709±85.08 58.366±3.15 88.439±6.67 111.689±43.89 86.208±24.29 61.758±11.10
ENSMUST00000161887 92.393±12.20 238.341±42.72 105.806±25.82 73.506±15.68 118.813±32.73 142.696±38.76 247.792±44.42 120.667±52.58 95.384±3.17 72.605±11.65 119.985±86.27 146.526±33.17 102.532±1.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UP CIL_0000UP_0002 CGP 9:20618118-20647140
CIL_0005J0 CIL_0005J0_0002 CGP 9:20642878-20666584

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000198258 UBL5 ubiquitin-like 5 protein_coding Homo_sapiens

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