C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 85C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000084883 Ccdc85c 10090 - 12:108206345-108275417 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000136175 Ccdc85c-201 108206345-108275417 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastLiverOvaryPlacentaTestisENSMUST00000136175
Transcript ID Adrenal Bladder Brain Breast Liver Ovary Placenta Testis
ENSMUST00000136175 6.112±0.00 7.640±0.00 40.469±22.93 0.437±0.00 1.568±1.50 7.121±6.92 20.749±10.10 8.978±0.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CK CIL_0009CK_0002 VISTA 12:107949271-108552884
CIL_0003HE CIL_0003HE_0002 CGP 12:108179738-108275417
CIL_0001A9 CIL_0001A9_0003 CGP 12:108206345-108328300

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005923 IEA tight junction
GO:0021987 IMP cerebral cortex development
GO:0043296 IDA apical junction complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005232 ccdc85ca coiled-coil domain containing 85C, a protein_coding Danio_rerio
ENSDARG00000079555 ccdc85cb coiled-coil domain containing 85C, b protein_coding Danio_rerio
ENSG00000205476 CCDC85C coiled-coil domain containing 85C protein_coding Homo_sapiens

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