C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA E130006D01 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000085271 E130006D01Rik 10090 - 5:111734284-111761725 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000129065 E130006D01Rik-002 111734303-111761725 lincRNA
  ENSMUST00000129146 E130006D01Rik-003 111734410-111761700 lincRNA
  ENSMUST00000137398 E130006D01Rik-001 111734284-111761703 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000129065ENSMUST00000129146ENSMUST00000137398
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000129065 0.121±0.00 0.225±0.16 1.566±0.00 0.143±0.00 N/A 0.060±0.00 0.054±0.04 0.137±0.05 0.155±0.04 0.388±0.12 0.032±0.02 0.345±0.16
ENSMUST00000129146 0.122±0.00 N/A 0.150±0.00 N/A 0.137±0.04 0.220±0.00 0.031±0.01 0.146±0.00 0.105±0.00 N/A 0.189±0.00 0.162±0.00
ENSMUST00000137398 N/A 0.093±0.00 1.079±0.91 N/A N/A 0.049±0.00 0.053±0.04 N/A 0.151±0.10 0.149±0.04 0.106±0.11 0.106±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RE CIL_0008RE_0002 VISTA 5:111235796-111837085
CIL_0008WL CIL_0008WL_0002 VISTA 5:111277305-111878296
CIL_00088U CIL_00088U_0002 VISTA 5:111301262-111902739
CIL_0008PX CIL_0008PX_0002 VISTA 5:111375073-111976405

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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