C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 9430008C03 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000085385 9430008C03Rik 10090 - 2:158353700-158361580 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000133449 9430008C03Rik-001 158355765-158361580 lincRNA
  ENSMUST00000138592 9430008C03Rik-008 158360867-158361542 lincRNA
  ENSMUST00000141809 9430008C03Rik-004 158355307-158361510 lincRNA
  ENSMUST00000149667 9430008C03Rik-003 158355785-158361513 retained_intron
  ENSMUST00000151331 9430008C03Rik-005 158359239-158361475 lincRNA
  ENSMUST00000152125 9430008C03Rik-006 158355765-158361519 lincRNA
  ENSMUST00000154030 9430008C03Rik-002 158355765-158361522 retained_intron
  ENSMUST00000154242 9430008C03Rik-007 158356022-158358464 lincRNA
  ENSMUST00000186993 9430008C03Rik-009 158353700-158356843 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000133449ENSMUST00000141809ENSMUST00000149667ENSMUST00000154030ENSMUST00000186993
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000133449 N/A 3.859±0.05 N/A N/A N/A 3.082±0.70 N/A 2.343±0.35 N/A 2.907±0.00 N/A N/A N/A 3.883±0.56
ENSMUST00000141809 N/A 2.943±0.00 N/A 1.427±0.00 N/A N/A N/A N/A N/A 1.639±0.00 N/A 4.499±0.45 2.575±0.90 1.148±0.00
ENSMUST00000149667 4.769±2.29 3.178±0.83 5.241±0.46 3.014±0.37 2.771±0.51 2.093±0.81 0.737±0.18 1.641±0.46 3.188±0.98 2.576±0.37 0.395±0.14 6.239±1.87 2.734±0.91 1.262±0.12
ENSMUST00000154030 7.052±4.94 4.851±1.45 3.695±0.00 3.567±0.62 6.183±1.66 4.589±0.63 0.772±0.19 2.485±0.94 3.745±1.05 2.794±0.13 0.515±0.08 11.211±2.19 3.451±0.29 1.991±0.40
ENSMUST00000186993 3.048±1.89 2.469±0.00 3.645±0.18 2.000±1.06 2.432±0.23 2.216±0.56 0.591±0.10 1.371±0.65 2.835±1.29 2.019±0.35 0.269±0.05 3.190±0.98 1.893±0.53 1.276±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081Y CIL_00081Y_0002 VISTA 2:158139041-158740388

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

Loading