C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 3110053B16 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000085642 3110053B16Rik 10090 - 12:20874125-20921262 pseudogene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000127917 3110053B16Rik-004 20876750-20921228 processed_transcript
  ENSMUST00000140360 3110053B16Rik-002 20875640-20921262 processed_transcript
  ENSMUST00000143905 3110053B16Rik-005 20876427-20921053 processed_transcript
  ENSMUST00000144811 3110053B16Rik-003 20877084-20921262 processed_transcript
  ENSMUST00000145605 3110053B16Rik-001 20874125-20877071 transcribed_unprocessed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000127917ENSMUST00000140360ENSMUST00000143905ENSMUST00000144811ENSMUST00000145605
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000127917 N/A 2.453±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140360 1.370±0.72 1.169±0.26 N/A N/A 1.034±0.59 1.298±0.25 0.163±0.00 0.457±0.12 0.364±0.19 1.220±0.16 0.081±0.02 1.591±0.44 0.561±0.00 2.620±0.62
ENSMUST00000143905 0.475±0.00 N/A N/A 2.711±0.49 0.430±0.00 N/A 0.429±0.04 N/A N/A N/A 0.240±0.00 0.954±0.13 N/A N/A
ENSMUST00000144811 3.957±1.75 6.900±3.79 5.931±2.05 11.329±0.59 3.859±3.97 5.456±1.80 1.418±0.91 3.089±1.56 2.176±0.50 3.242±0.48 1.011±0.25 7.464±5.21 9.989±3.32 4.228±1.57
ENSMUST00000145605 0.874±0.00 N/A N/A 2.467±0.00 N/A N/A N/A N/A N/A N/A 0.154±0.00 N/A 1.564±0.76 0.636±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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