C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small nucleolar RNA host gene 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000086290 Snhg12 10090 + 4:132308678-132311024 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000126380 Snhg12-005 132308693-132310759 lincRNA
  ENSMUST00000128000 Snhg12-003 132309629-132311024 lincRNA
  ENSMUST00000128131 Snhg12-004 132309818-132310995 lincRNA
  ENSMUST00000137343 Snhg12-006 132308678-132309971 lincRNA
  ENSMUST00000144705 Snhg12-001 132308678-132311022 lincRNA
  ENSMUST00000153474 Snhg12-002 132308678-132311024 lincRNA
  ENSMUST00000182826 Snhg12-007 132310187-132311024 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000126380ENSMUST00000128000ENSMUST00000128131ENSMUST00000137343ENSMUST00000144705ENSMUST00000153474ENSMUST00000182826
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000126380 4.069±0.23 4.288±0.00 N/A 3.908±0.89 2.628±1.80 3.286±1.00 1.456±0.24 2.737±0.68 4.620±3.14 2.362±0.52 N/A 2.582±0.49 1.811±0.00 0.899±0.00
ENSMUST00000128000 5.456±1.46 N/A 6.966±1.63 6.958±1.49 3.841±0.92 N/A 1.847±0.26 3.600±0.44 13.811±7.15 3.869±0.45 N/A 6.382±3.92 5.169±4.25 1.758±0.98
ENSMUST00000128131 7.969±0.00 5.335±1.02 N/A 4.725±0.00 2.954±0.97 3.140±0.93 0.827±0.00 2.576±0.57 2.622±0.54 3.868±0.66 N/A 4.767±1.32 3.175±0.00 N/A
ENSMUST00000137343 20.874±6.40 13.568±6.56 N/A 13.907±6.14 18.573±10.20 9.510±2.60 4.244±0.89 12.824±2.40 8.726±6.63 11.125±2.22 2.760±0.00 16.062±12.31 11.295±0.00 4.051±2.92
ENSMUST00000144705 3.752±0.00 N/A 4.141±0.99 3.231±0.26 2.633±0.00 N/A N/A 1.459±0.00 5.207±3.20 N/A 0.914±0.28 2.954±1.47 2.928±1.67 0.799±0.00
ENSMUST00000153474 4.207±0.86 11.147±5.92 12.823±3.79 15.173±12.28 2.149±0.04 2.320±0.00 1.186±0.00 3.422±0.61 12.594±12.03 N/A 4.390±1.02 16.427±9.80 12.075±5.82 3.003±0.84
ENSMUST00000182826 N/A N/A N/A N/A N/A N/A N/A N/A 2.144±0.00 N/A 2.459±0.00 5.326±0.00 11.033±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099N CIL_00099N_0002 VISTA 4:131775516-132379227

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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