C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: non-coding transcript 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000087090 Nctc1 10090 - 7:142544609-142558596 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000123668 Nctc1-002 142553700-142558596 retained_intron
  ENSMUST00000132167 Nctc1-001 142544609-142558596 antisense

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000123668ENSMUST00000132167
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000123668 N/A N/A 0.007±0.00 3.455±0.67 0.077±0.03 0.007±0.00 0.510±0.03 33.274±3.96 0.072±0.03 0.007±0.00 N/A
ENSMUST00000132167 0.014±0.00 0.034±0.00 N/A 3.628±0.80 0.111±0.08 0.022±0.01 0.320±0.26 12.789±3.69 0.086±0.07 0.017±0.00 0.022±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MR CIL_0008MR_0002 VISTA 7:142247512-142849546
CIL_0007RG CIL_0007RG_0002 VISTA 7:142251566-142854813
CIL_00097V CIL_00097V_0002 VISTA 7:142268912-142873912
CIL_0005N8 CIL_0005N8_0003 CGP 7:142532799-142666816

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

Loading