C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LINE-1 type transposase domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000087166 L1td1 10090 + 4:98726734-98738480 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000152889 L1td1-001 98726734-98733644 protein_coding
  ENSMUST00000154279 L1td1-002 98726748-98738480 protein_coding
  ENSMUST00000171708 L1td1-003 98726793-98733560 protein_coding
  ENSMUST00000173659 L1td1-004 98733203-98738116 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverLungOvaryPlacentaTestisENSMUST00000152889ENSMUST00000154279ENSMUST00000173659
Transcript ID Bladder Brain Breast Heart Liver Lung Ovary Placenta Testis
ENSMUST00000152889 N/A 0.053±0.00 N/A 0.113±0.00 N/A 0.172±0.00 N/A N/A 0.228±0.07
ENSMUST00000154279 0.005±0.00 0.028±0.01 N/A 0.015±0.00 0.005±0.00 0.037±0.02 N/A 5.500±2.06 0.348±0.36
ENSMUST00000173659 0.005±0.00 N/A 0.083±0.00 0.030±0.01 0.006±0.00 0.029±0.00 0.086±0.02 2.048±0.99 0.027±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002G0 CIL_0002G0_0002 CGP 4:98395785-98738480
CIL_0002G3 CIL_0002G3_0002 CGP 4:98726734-98817537

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000240563 L1TD1 LINE-1 type transposase domain containing 1 protein_coding Homo_sapiens

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