C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 2610035D17 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000087259 2610035D17Rik 10090 - 11:113043895-113201838 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000127263 2610035D17Rik-003 113043895-113201838 lincRNA
  ENSMUST00000136438 2610035D17Rik-002 113043895-113173077 lincRNA
  ENSMUST00000145206 2610035D17Rik-004 113043895-113201822 lincRNA
  ENSMUST00000150712 2610035D17Rik-001 113044517-113173077 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000127263ENSMUST00000136438ENSMUST00000145206ENSMUST00000150712
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000127263 0.860±0.57 N/A 6.264±1.66 3.499±2.28 0.659±0.28 3.182±1.33 0.207±0.00 0.509±0.00 0.116±0.00 0.237±0.01 N/A 1.738±0.75 N/A 0.994±0.26
ENSMUST00000136438 1.517±0.67 3.452±0.51 4.899±0.82 1.492±0.40 3.154±1.37 3.208±0.62 3.032±1.65 4.484±0.95 0.549±0.43 1.720±0.36 3.353±0.81 2.122±0.76 1.457±1.17 2.383±0.48
ENSMUST00000145206 0.568±0.00 N/A N/A 1.033±0.00 0.647±0.00 1.477±0.00 N/A 0.558±0.02 0.083±0.01 0.317±0.14 N/A 1.149±0.77 N/A 0.383±0.11
ENSMUST00000150712 N/A 0.978±0.00 N/A N/A 0.656±0.00 N/A N/A N/A 0.193±0.15 N/A N/A 1.557±0.61 0.264±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096Y CIL_00096Y_0002 VISTA 11:112480251-113081039
CIL_00096Z CIL_00096Z_0002 VISTA 11:112713161-113315514
CIL_00067E CIL_00067E_0002 CGP 11:112782224-113650079

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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