C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: expressed sequence AA415398
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000087385 AA415398 10090 - 4:119530308-119539529 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000079611 AA415398-001 119530308-119538769 protein_coding
  ENSMUST00000137671 AA415398-003 119531663-119539130 processed_transcript
  ENSMUST00000149305 AA415398-002 119531436-119535245 processed_transcript
  ENSMUST00000177165 AA415398-004 119533544-119539529 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079611ENSMUST00000137671ENSMUST00000177165
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079611 0.751±0.00 N/A 1.111±0.05 0.906±0.33 1.220±0.07 0.680±0.20 0.753±0.00 1.371±0.48 0.766±0.42 0.506±0.08 0.724±0.30 1.320±0.66 1.106±0.93 0.418±0.00
ENSMUST00000137671 N/A N/A 0.703±0.07 1.151±0.41 N/A N/A N/A N/A 0.228±0.09 N/A N/A 1.184±0.07 0.689±0.46 3.646±0.00
ENSMUST00000177165 5.520±0.00 13.418±3.68 N/A 1.829±0.23 5.192±2.76 2.641±0.92 1.651±0.00 4.521±1.13 2.099±0.92 2.856±0.87 N/A 5.807±1.65 0.951±0.00 3.840±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PM CIL_0008PM_0002 VISTA 4:118938785-119540197

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000172969 FRG2C FSHD region gene 2 family, member C protein_coding Homo_sapiens
ENSG00000205097 FRG2 FSHD region gene 2 protein_coding Homo_sapiens
ENSG00000225899 FRG2B FSHD region gene 2 family, member B protein_coding Homo_sapiens

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