C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA C230014O12 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000087461 C230014O12Rik 10090 - 2:34018289-34111444 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000134921 C230014O12Rik-001 34018289-34107729 lincRNA
  ENSMUST00000147871 C230014O12Rik-003 34097397-34111444 lincRNA
  ENSMUST00000149707 C230014O12Rik-002 34100044-34107735 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000134921ENSMUST00000147871ENSMUST00000149707
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000134921 0.014±0.00 0.274±0.10 0.403±0.13 0.066±0.03 0.028±0.00 0.010±0.00 0.021±0.01 0.009±0.01 0.349±0.06 0.060±0.05 0.011±0.01 0.027±0.02
ENSMUST00000147871 N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A
ENSMUST00000149707 N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A 0.107±0.05 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008M0 CIL_0008M0_0002 VISTA 2:33488143-34090459
CIL_0007X9 CIL_0007X9_0002 VISTA 2:33575330-34178839
CIL_00095V CIL_00095V_0002 VISTA 2:33716020-34317341
CIL_0007YU CIL_0007YU_0002 VISTA 2:33733022-34333763
CIL_0007LN CIL_0007LN_0002 UCNEbase 2:33746984-34647960
CIL_0008R2 CIL_0008R2_0002 VISTA 2:33764832-34366528
CIL_000960 CIL_000960_0002 VISTA 2:33866778-34467772
CIL_000849 CIL_000849_0002 VISTA 2:33929436-34530577
CIL_0007QH CIL_0007QH_0002 VISTA 2:33935168-34536289
CIL_0007YW CIL_0007YW_0002 VISTA 2:33955333-34557138
CIL_00086D CIL_00086D_0002 VISTA 2:33960195-34561369
CIL_0008I6 CIL_0008I6_0002 VISTA 2:33986508-34588340
CIL_000848 CIL_000848_0002 VISTA 2:34010581-34611103

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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