C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA B230216N24 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000089706 B230216N24Rik 10090 - 1:98031116-98057680 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000159324 B230216N24Rik-001 98031127-98047759 sense_intronic
  ENSMUST00000159353 B230216N24Rik-003 98031868-98057680 sense_intronic
  ENSMUST00000160588 B230216N24Rik-004 98031116-98035675 retained_intron
  ENSMUST00000161661 B230216N24Rik-002 98031717-98047793 sense_intronic
  ENSMUST00000187924 B230216N24Rik-005 98045817-98047754 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000159324ENSMUST00000159353ENSMUST00000160588ENSMUST00000161661ENSMUST00000187924
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000159324 N/A 0.361±0.00 N/A 3.884±0.76 0.253±0.00 0.680±0.00 N/A N/A N/A 0.615±0.08 N/A 0.367±0.03 0.334±0.11 N/A
ENSMUST00000159353 N/A 0.457±0.16 N/A N/A N/A 1.776±0.00 N/A 11.958±1.28 N/A N/A N/A 0.899±0.54 N/A N/A
ENSMUST00000160588 0.272±0.12 0.095±0.05 0.494±0.04 6.857±0.38 0.330±0.10 0.609±0.14 0.138±0.07 0.888±0.22 0.102±0.05 0.448±0.13 0.085±0.02 0.252±0.12 0.332±0.18 0.105±0.06
ENSMUST00000161661 0.205±0.01 0.123±0.00 N/A N/A 0.334±0.11 0.734±0.07 N/A 1.828±0.09 0.115±0.04 0.540±0.27 0.149±0.00 N/A N/A 0.099±0.00
ENSMUST00000187924 0.157±0.08 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.021±0.00 0.115±0.01 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WC CIL_0007WC_0002 VISTA 1:97887842-98493251

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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