C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 3110039M20 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000089922 3110039M20Rik 10090 + 12:49385174-49407346 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000110746 3110039M20Rik-001 49385174-49394127 protein_coding
  ENSMUST00000127041 3110039M20Rik-002 49389652-49407346 processed_transcript
  ENSMUST00000145291 3110039M20Rik-003 49390659-49407134 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverTestisENSMUST00000110746ENSMUST00000127041
Transcript ID Kidney Liver Testis
ENSMUST00000110746 0.008±0.00 N/A N/A
ENSMUST00000127041 N/A 0.014±0.00 0.097±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095I CIL_00095I_0002 VISTA 12:49074505-49676068
CIL_0008Y3 CIL_0008Y3_0002 VISTA 12:49210396-49811504
CIL_0007MH CIL_0007MH_0002 UCNEbase 12:49381405-50295756

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070769 foxg1a forkhead box G1a protein_coding Danio_rerio
ENSG00000176165 FOXG1 forkhead box G1 protein_coding Homo_sapiens

Loading