C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Palm2-Akap2 readthrough transcript
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000089945 Palm2Akap2 10090 + 4:57568179-57896982 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000098066 Palm2Akap2-002 57568179-57896982 nonsense_mediated_decay
  ENSMUST00000126465 Palm2Akap2-003 57568330-57854584 nonsense_mediated_decay
  ENSMUST00000150412 Palm2Akap2-001 57637823-57894718 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartOvaryPlacentaTestisENSMUST00000098066ENSMUST00000150412
Transcript ID Brain Breast Heart Ovary Placenta Testis
ENSMUST00000098066 N/A 2.969±0.60 3.057±0.00 N/A N/A N/A
ENSMUST00000150412 12.891±0.00 N/A N/A 11.541±0.00 20.423±1.71 2.209±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GE CIL_0001GE_0002 CGP 4:57190841-57712016
CIL_00016E CIL_00016E_0002 CGP 4:57434247-57896982
CIL_0007PS CIL_0007PS_0002 VISTA 4:57545561-58147767
CIL_0007HX CIL_0007HX_0002 CGP 4:57568179-57896984

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0008360 IEA regulation of cell shape
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000157654 PALM2-AKAP2 PALM2-AKAP2 readthrough protein_coding Homo_sapiens
ENSG00000241978 AKAP2 A kinase (PRKA) anchor protein 2 protein_coding Homo_sapiens

Loading