C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: POU domain, class 3, transcription factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000090125 Pou3f1 10090 + 4:124656807-124660655 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053491 Pou3f1-001 124656807-124660655 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053491
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053491 0.055±0.01 0.077±0.03 0.103±0.00 8.018±2.51 0.230±0.12 0.106±0.06 0.046±0.02 0.023±0.02 0.009±0.01 0.076±0.02 0.165±0.06 0.142±0.07 0.763±0.76 0.064±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T4 CIL_0008T4_0002 VISTA 4:124059244-124661242
CIL_0008OB CIL_0008OB_0002 VISTA 4:124075081-124676309
CIL_0008SL CIL_0008SL_0002 VISTA 4:124095349-124696097
CIL_0008II CIL_0008II_0002 VISTA 4:124101702-124703017
CIL_0007QK CIL_0007QK_0002 VISTA 4:124155077-124756356
CIL_0008ZP CIL_0008ZP_0002 VISTA 4:124158302-124761497
CIL_0007QI CIL_0007QI_0002 VISTA 4:124177456-124779254
CIL_000892 CIL_000892_0002 VISTA 4:124220131-124821365
CIL_0008EP CIL_0008EP_0002 VISTA 4:124226300-124827138
CIL_0008NZ CIL_0008NZ_0002 VISTA 4:124251046-124852185
CIL_0007UI CIL_0007UI_0002 VISTA 4:124315408-124916812
CIL_00095Y CIL_00095Y_0002 VISTA 4:124371949-124972943
CIL_0003Q5 CIL_0003Q5_0002 CGP 4:124656807-124693600

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001105 IDA RNA polymerase II transcription coactivator activity
GO:0003677 IDA DNA binding
GO:0003705 ISO RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0006366 ISO transcription from RNA polymerase II promoter
GO:0008544 IGI epidermis development
GO:0010628 IDA positive regulation of gene expression
GO:0014044 IMP Schwann cell development
GO:0022011 IGI myelination in peripheral nervous system
GO:0030216 IGI keratinocyte differentiation
GO:0030900 IMP forebrain development
GO:0042552 IMP myelination
GO:0043565 IEA sequence-specific DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 ISO positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009823 pou3f1 POU class 3 homeobox 1 protein_coding Danio_rerio
ENSG00000185668 POU3F1 POU class 3 homeobox 1 protein_coding Homo_sapiens

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