C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sterile alpha motif domain containing 15
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000090812 Samd15 10090 + 12:87199723-87213541 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000169669 Samd15-201 87200750-87201943 protein_coding
  ENSMUST00000182869 Samd15-001 87200543-87213541 protein_coding
  ENSMUST00000183118 Samd15-003 87199767-87208858 processed_transcript
  ENSMUST00000183251 Samd15-002 87199723-87209180 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000169669ENSMUST00000182869ENSMUST00000183118ENSMUST00000183251
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000169669 N/A 0.416±0.02 N/A 2.613±0.00 0.106±0.00 N/A N/A 0.045±0.00 0.013±0.00 0.060±0.00 0.030±0.01 0.386±0.00 0.080±0.03 102.023±0.00
ENSMUST00000182869 0.019±0.00 N/A 0.039±0.00 0.089±0.00 0.071±0.04 N/A 0.042±0.00 0.048±0.00 N/A 0.029±0.00 0.037±0.00 0.166±0.04 0.035±0.02 7.385±3.72
ENSMUST00000183118 0.243±0.00 0.398±0.15 N/A N/A 0.407±0.00 N/A 0.189±0.13 N/A 0.048±0.00 0.359±0.08 0.193±0.00 0.766±0.23 N/A 10.620±1.54
ENSMUST00000183251 0.459±0.25 0.456±0.04 0.247±0.01 0.403±0.13 0.284±0.11 0.393±0.23 0.238±0.08 0.457±0.12 0.543±0.52 0.302±0.20 0.077±0.03 0.859±0.36 0.337±0.25 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003P1 CIL_0003P1_0002 CGP 12:87147707-87200229
CIL_00077I CIL_00077I_0002 CGP 12:87166242-87213541
CIL_00077G CIL_00077G_0002 CGP 12:87199723-87233556

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000100583 SAMD15 sterile alpha motif domain containing 15 protein_coding Homo_sapiens

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