C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear paraspeckle assembly transcript 1 (non-protein coding)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000092274 Neat1 10090 - 19:5824708-5845478 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000173672 Neat1-001 5824708-5845478 lincRNA
  ENSMUST00000174287 Neat1-002 5842307-5845476 lincRNA
  ENSMUST00000174829 Neat1-003 5843681-5845259 lincRNA

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000173672ENSMUST00000174287ENSMUST00000174829
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000173672 12.182±2.35 13.956±3.73 N/A 0.245±0.13 12.271±0.90 17.536±1.81 8.833±0.96 9.480±1.50 8.593±8.98 20.987±2.51 7.418±1.27 10.473±4.97 3.175±2.08 2.936±1.60
ENSMUST00000174287 317.591±163.64 373.446±47.69 269.715±30.51 10.333±11.27 197.315±15.53 243.627±34.91 147.034±33.82 217.013±9.06 73.373±54.68 456.414±57.20 397.413±80.07 104.215±45.07 90.612±26.68 34.005±11.72
ENSMUST00000174829 217.905±133.83 108.479±10.57 N/A 30.617±0.00 148.142±21.00 97.088±6.33 73.433±1.24 103.477±19.91 N/A 225.295±29.76 N/A 58.067±19.21 98.507±37.57 18.902±4.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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