C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cyclin-dependent kinase 3, pseudogene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000092300 Cdk3-ps 10090 + 11:116216003-116220287 polymorphic_pseudogene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000173567 Cdk3-ps-003 116216540-116220287 processed_transcript
  ENSMUST00000174177 Cdk3-ps-001 116216003-116219776 polymorphic_pseudogene
  ENSMUST00000174248 Cdk3-ps-002 116216486-116217184 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000173567ENSMUST00000174177ENSMUST00000174248
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000173567 0.532±0.45 0.297±0.16 0.939±0.28 1.699±0.92 0.453±0.18 0.641±0.29 0.235±0.04 0.142±0.08 0.275±0.18 0.495±0.25 0.173±0.07 0.828±0.40 0.479±0.17 0.334±0.17
ENSMUST00000174177 0.223±0.11 0.321±0.23 0.238±0.00 0.753±0.42 0.221±0.06 0.404±0.23 0.081±0.00 0.107±0.09 0.229±0.09 0.258±0.08 0.220±0.04 0.426±0.14 0.170±0.02 0.228±0.07
ENSMUST00000174248 N/A 0.592±0.28 0.698±0.24 N/A 0.405±0.16 N/A 0.173±0.05 0.284±0.11 0.118±0.07 0.773±0.00 0.227±0.08 0.573±0.22 0.207±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0002 VISTA 11:116019003-116619995

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004693 IEA cyclin-dependent protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0007067 IEA mitotic nuclear division
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000250506 CDK3 cyclin-dependent kinase 3 protein_coding Homo_sapiens
ENSG00000261408 TEN1-CDK3 TEN1-CDK3 readthrough (NMD candidate) protein_coding Homo_sapiens

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