C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mediator complex subunit 20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000092558 Med20 10090 + 17:47611582-47624418 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024778 Med20-001 47611582-47624418 protein_coding
  ENSMUST00000133855 Med20-004 47611621-47613295 retained_intron
  ENSMUST00000138638 Med20-003 47611608-47624248 retained_intron
  ENSMUST00000149893 Med20-002 47611585-47619563 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024778ENSMUST00000138638
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024778 19.424±2.17 21.073±1.14 18.540±3.48 15.599±6.55 19.281±1.86 15.694±1.83 8.863±0.38 14.586±1.24 15.978±4.13 15.423±1.68 10.806±0.95 18.721±2.63 17.558±4.52 4.809±0.00
ENSMUST00000138638 4.227±0.00 N/A 4.013±0.77 1.652±0.00 3.118±0.00 4.384±0.00 N/A N/A 3.795±0.68 3.510±0.25 N/A 3.397±0.13 1.971±0.31 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000963 CIL_000963_0002 VISTA 17:47571879-48173076
CIL_0006L5 CIL_0006L5_0002 CGP 17:47599331-47624418

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0016592 IDA mediator complex
GO:0035914 IMP skeletal muscle cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000046006 med20 mediator complex subunit 20 protein_coding Danio_rerio
ENSG00000124641 MED20 mediator complex subunit 20 protein_coding Homo_sapiens

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