C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene, 28049
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000093954 Gm28049 10090 - 14:69363504-69503362 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000179116 Gm28049-001 69462309-69503362 protein_coding
  ENSMUST00000180059 Gm28049-007 69488949-69503232 protein_coding
  ENSMUST00000183695 Gm28049-002 69365102-69503236 nonsense_mediated_decay
  ENSMUST00000183840 Gm28049-006 69373826-69503362 nonsense_mediated_decay
  ENSMUST00000183917 Gm28049-005 69363504-69503320 nonsense_mediated_decay
  ENSMUST00000184039 Gm28049-003 69419394-69426477 processed_transcript
  ENSMUST00000184816 Gm28049-004 69363914-69503226 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000179116ENSMUST00000180059ENSMUST00000183695ENSMUST00000183840ENSMUST00000183917ENSMUST00000184039
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000179116 0.027±0.00 0.085±0.08 0.002±0.00 N/A 0.111±0.08 0.021±0.00 0.043±0.02 0.032±0.03 0.047±0.02 0.061±0.03 0.087±0.05 0.454±0.10
ENSMUST00000180059 1.078±0.34 N/A N/A 0.371±0.17 0.431±0.32 0.778±0.00 0.983±0.17 1.113±1.35 0.704±0.46 0.712±0.38 0.679±0.18 3.202±0.18
ENSMUST00000183695 0.033±0.00 0.065±0.01 N/A 0.102±0.00 0.137±0.00 0.055±0.00 0.086±0.05 0.083±0.04 0.050±0.01 0.031±0.00 0.091±0.00 N/A
ENSMUST00000183840 0.108±0.00 0.121±0.02 N/A 0.203±0.05 0.274±0.15 0.240±0.00 0.241±0.18 0.277±0.22 0.165±0.00 0.178±0.06 0.367±0.27 1.144±0.24
ENSMUST00000183917 N/A 0.043±0.01 N/A 0.060±0.03 N/A 0.039±0.02 N/A 0.032±0.02 0.043±0.02 0.045±0.03 0.062±0.03 N/A
ENSMUST00000184039 0.514±0.00 0.363±0.00 N/A N/A 0.588±0.00 N/A N/A N/A 0.244±0.00 N/A N/A 1.114±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YD CIL_0007YD_0002 VISTA 14:69222690-69823937
CIL_0008FQ CIL_0008FQ_0002 VISTA 14:69236074-69837250

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005381 IMP iron ion transmembrane transporter activity
GO:0005743 IDA mitochondrial inner membrane
GO:0016021 IEA integral component of membrane
GO:0034755 IMP iron ion transmembrane transport
GO:0048250 IMP mitochondrial iron ion transport
GO:0055072 IEA iron ion homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000073743 slc25a37 solute carrier family 25, member 37 protein_coding Danio_rerio

Loading